Showing posts with label landscape genetics. Show all posts
Showing posts with label landscape genetics. Show all posts

Thursday, August 12, 2021

New paper - Holocene-era landscape conditions affect genetic connectivity in a sagebrush obligate species, the Pygmy Rabbit (Brachylagus idahoensis)

Our paper "Holocene-era landscape conditions affect genetic connectivity in a sagebrush obligate species, the Pygmy Rabbit (Brachylagus idahoensis)", has been accepted for publication in Landscape Ecology.

Byer, N.W., Dilts, T.E., Larrucea, E.S., Crowell, M.D., Shoemaker, K.T., Weisberg, P.J., & Matocq, M.D. (2021) Holocene-era landscape conditions affect genetic connectivity in a sagebrush obligate species, the pygmy rabbit (Brachylagus idahoensis). Landscape Ecology. https://doi.org/10.1007/s10980-021-01328-1
 

https://link.springer.com/article/10.1007/s10980-021-01328-1

 



Tuesday, January 23, 2018

New tool - spider diagrams for ArcMap

There have been various renditions of tools for generating spider diagram tools in ArcMap throughout the years.  Over time as many of the Esri tool-posting websites have become defunct these third party tools have become difficult to find. I decided to put together a simple tool for generating spider diagrams for my own purposes and decided to share it.

Spider lines depict Euclidean distance-based routes that connect each pair of points. They are a useful tool for visualization. In landscape genetics this represents the isolation-by-distance hypothesis. Previously there were other 3rd party tools that achieved this on the Arcscripts website. Currently it appears that this functionality is only available with a Business Analyst license of ArcGIS. This tool make a few assumptions:

1. You wish to connect all pairs of points
2. You have a point shapefile
3. The point shapefile is in a projected coordinate system
4. The point shapefile has fields called "Easting" and "Northing" that represent the X and Y coordinates respectively. If these fields are not named this excatly then the tool will fail
5. You have a field that describes the name of the pairs of the site (point).

Please do not use a geodatabase feature class.

Output line shapefile (or geodatabase if you specify that) attributed with the following:

1. Input FID
2. Easting
3. Northing
4. Easting_1
5. Northing_1
6. Near_FID
7. Site
8. Site_1

If you end up using this tool for published work please feel free to cite this as:

Dilts, T.E. (2018) Spider Diagram Tools for ArcGIS (insert your version here). University of Nevada Reno, Available at: https://www.arcgis.com/home/item.html?id=fb7d157782a549b182c957abbaaf45c2.

You can download the tool by clicking HERE.

Monday, January 11, 2016

ArcGIS Idea - geoprocessing tool to create new network dataset

This one doesn't seem like rocket science to me.  It should be possible to create a new network dataset in ArcGIS in a model or with Arcpy - https://c.na9.visual.force.com/apex/ideaView?id=087E00000004nNqIAI